01 — SUBMIT
Pick a tool
Folding VHH, Flow, Pathway Index, Metabopath, or End-to-End Delivery. Upload a PDB or paste a sequence and spend quota.
Most jobs enter a queue. You do not need to sit on a terminal.
01 — SUBMIT
Folding VHH, Flow, Pathway Index, Metabopath, or End-to-End Delivery. Upload a PDB or paste a sequence and spend quota.
02 — QUEUE
Progress stays on the job card. Refresh when you come back; the status is there.
03 — RESULTS
Download from the task card or User Portal → Data Room. Custom deliveries show contract → design → screening → files.
Molecular
Diffusion and Flow for scaffolds; inverse folding for sequences; Folding VHH and OpenDDE; Gibbs minimization and MD requests.
Folding VHHPathway
KEGG index and Path Tracer, RBS Builder, sequence tuning, FBA perturbations, multi-model kcat, Metabopath merging host energy with a target route.
MetabopathCompute
Each job has a cost. Remaining quota sits in the sidebar. GPU Booking reserves lab node time when you need a machine, not just an API.
GPU BookingDifferent workflows, open-ended possibilities.
Practical questions from first login
Open biodesign.top, register or sign in, then pick one real problem — Folding VHH, Flow, or Pathway Index — and run submit → wait → download once.
Task History for status. Task cards or User Portal → Data Room for files. Custom projects also show delivery stages in the portal.
Compute units. Examples: Gibbs minimization 300, FBA 50, kcat 150, Metabopath 80, nanobody scaffold 400, full pipeline 1500. Folding may be free on some accounts.
No. The platform cuts setup and waiting. Interpretation, validation, and experiment stay with you.
Need a custom delivery?
Use End-to-End Delivery →